PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv5_113160_mzap.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 342aa    MW: 38201.1 Da    PI: 8.1947
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv5_113160_mzap.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.6e-09153200455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L+ ++P +    +k   Ka +L + ++Y++sLq
  Bv5_113160_mzap.t1 153 SHSLAERVRREKISERMKMLQAIVPGC----NKVTGKALMLDEIINYVQSLQ 200
                         8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.37E-10147204No hitNo description
SuperFamilySSF474594.58E-17147218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.6E-17149219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.173149199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-6153200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.7E-10155205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MAAFQQFPTS FLVDSVFNYV PAIKTPEILD EFFPNLNNFY QSNENSQKSL IIHNREVSSI  60
ESSCLEQQSL SMADKADSGE QVTQTSLPIK RKRKSRKGSS PNSAISKPRK VKCKKQKEEK  120
EVTTDEKKEN NSNEEPPKGY IHVRARRGQA TDSHSLAERV RREKISERMK MLQAIVPGCN  180
KVTGKALMLD EIINYVQSLQ NQVEFLSMKL ASLDPMVYNF GLMDHNPMVF GTQQAINNGM  240
ALPMPLIQPT SNGGSSVGQP EAFANNLNAL SCSTTSSATT PTFPGPIVDS SANLFQQEQK  300
PSLLPLQLQD TGSLYWDVNE QQRQNFINQF GFSSCTNLYS LQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
190116RKRKSRKGSSPNSAISKPRKVKCKKQK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010678331.10.0PREDICTED: transcription factor bHLH137 isoform X2
TrEMBLA0A0J8CBB80.0A0A0J8CBB8_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.27e-46bHLH family protein